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Annotation Overview for fig|208964.1.peg.2001 in Pseudomonas aeruginosa PAO1:
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)

current assignment
This feature plays multiple roles which are implemented by the same domain with a broad specificity. The roles are:
3-ketoacyl-CoA thiolase (EC 2.3.1.16)EC Number 2.3.1.16
Acetyl-CoA acetyltransferase (EC 2.3.1.9)EC Number 2.3.1.9
taxonomy id208964contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
annotation historyrun tool
FigFamFIG000004

This feature is part of a subsystem
  • In Butanol Biosynthesis its role is Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In Serine-glyoxylate cycle its role is 3-ketoacyl-CoA thiolase (EC 2.3.1.16).
  • In Acetyl-CoA fermentation to Butyrate its role is Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In Isoprenoid Biosynthesis its role is Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In Polyhydroxybutyrate metabolism its role is 3-ketoacyl-CoA thiolase (EC 2.3.1.16) and Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In Isoleucine degradation its role is 3-ketoacyl-CoA thiolase (EC 2.3.1.16).
  • In Polyhydroxybutyrate metabolism its role is 3-ketoacyl-CoA thiolase (EC 2.3.1.16) and Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In n-Phenylalkanoic acid degradation its role is 3-ketoacyl-CoA thiolase (EC 2.3.1.16).
  • In Glyoxylate bypass its role is Acetyl-CoA acetyltransferase (EC 2.3.1.9).
  • In MLST its role is Acetyl-CoA acetyltransferase (EC 2.3.1.9). However, the functionality of this subsystem has not yet been classified for this organism.
  • Reasons for Current Assignment

    The encoded protein plays multiple roles which are implemented by the same domain with a broad specificity. The roles are "3-ketoacyl-CoA thiolase (EC 2.3.1.16)" and "Acetyl-CoA acetyltransferase (EC 2.3.1.9)". The protein occurs in 8 subsystems: "Acetyl-CoA fermentation to Butyrate", "Butanol Biosynthesis", "Glyoxylate bypass", "Isoleucine degradation", "Isoprenoid Biosynthesis", "Polyhydroxybutyrate metabolism", "Serine-glyoxylate cycle", and "n-Phenylalkanoic acid degradation". In "Polyhydroxybutyrate metabolism", it occurs in close proximity on the chromosome with 5 other genes from the same subsystem. In "Serine-glyoxylate cycle", it occurs in close proximity on the chromosome with 2 other genes from the same subsystem. The function of genes having the same functional roles have been described in Homo sapiens (15733928, 7911016) and Chromobacterium violaceum (10427049). These are homologous proteins which implement the same function.

    Compare Regions

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.






    Topic revision: r6 - 02 Mar 2009 - 22:06:54 - Bruce Parrello
     
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    NMPDR is a collaboration among researchers from the Computation Institute of the University of Chicago, the Fellowship for Interpretation of Genomes (FIG), Argonne National Laboratory, and the National Center for Supercomputing Applications (NCSA) at the University of Illinois. NMPDR is funded by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract HHSN266200400042C. Banner images are copyright © Dennis Kunkel.